It seems like you’re thinking of entropy as a main driving force behind everything, where it’s not. Many processes create more complex things from less complex things, but ‘waste’ some energy in the process. It’s not a great analogy, but you could think of the universe as a block of marble. You can sculpt and carve it to form what you like, but every time you end up with less marble to work with.
The other thing is that there might be processes that can functionally “reverse entropy”. Our theories are limited to what we can observe, after all.
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